Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii fructose-bisphosphatase | I4I81_19860 | Q7U0N5 | Positive | 4145989 - 4147053 | 37472.8 |
| l,d-transpeptidase | I4I81_19865 | Not Available | Positive | 4147180 - 4147800 | 20985.1 |
| class ii fumarate hydratase | I4I81_19870 | Q9FBN6 | Positive | 4148491 - 4149888 | 48673.9 |
| eal domain-containing protein | I4I81_19875 | P75995 | Positive | 4149979 - 4151160 | 41159.4 |
| rdd family protein | I4I81_19880 | Not Available | Positive | 4151214 - 4151738 | 18178.4 |
| extracellular solute-binding protein | I4I81_19885 | Not Available | Positive | 4151862 - 4152998 | 38750.7 |
| abc transporter permease subunit | I4I81_19890 | P16701 | Positive | 4153069 - 4153914 | 28997.8 |
| abc transporter permease subunit | I4I81_19895 | Not Available | Positive | 4153911 - 4154690 | 27305.5 |
| abc transporter atp-binding protein | I4I81_19900 | Q2K8C8 | Positive | 4154687 - 4155646 | 33257.3 |
| yafy family transcriptional regulator | I4I81_19905 | O34920 | Negative | 4155789 - 4156754 | 35486.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
