Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | I4I81_19810 | P06134 | Positive | 4137503 - 4137991 | 17182.1 |
| hypothetical protein | I4I81_19815 | Not Available | Negative | 4137998 - 4138591 | 20149.3 |
| glycosyltransferase | I4I81_19820 | Q9F2F9 | Negative | 4138754 - 4139845 | 36470.2 |
| dna recombination protein rmuc | I4I81_19825 | Q9REQ3 | Positive | 4139869 - 4141473 | 57247.9 |
| hypothetical protein | I4I81_19830 | Not Available | Positive | 4141470 - 4142096 | 21207.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | I4I81_19835 | C1AYI4 | Negative | 4142026 - 4142982 | 34442.7 |
| lipid droplet-associated protein | I4I81_19840 | P9WM58 | Positive | 4143084 - 4143689 | 21659.2 |
| exodeoxyribonuclease vii large subunit | I4I81_19845 | Q73WH4 | Positive | 4143686 - 4144978 | 46498.1 |
| exodeoxyribonuclease vii small subunit | I4I81_19850 | Q5YQ91 | Positive | 4144971 - 4145186 | 7604.79 |
| duf4245 domain-containing protein | I4I81_19855 | Not Available | Negative | 4145262 - 4145873 | 20646.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
