Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | I4I81_19710 | C0H3Q8 | Positive | 4120693 - 4120971 | 10561.6 |
| voc family protein | I4I81_19715 | O32161 | Positive | 4120971 - 4121360 | 13944.5 |
| 3-deoxy-7-phosphoheptulonate synthase | I4I81_19720 | P35170 | Positive | 4121528 - 4122601 | 37362.7 |
| hypothetical protein | I4I81_19725 | Not Available | Negative | 4122487 - 4122867 | 13579.8 |
| class f sortase | I4I81_19730 | Not Available | Negative | 4122864 - 4123481 | 21087.2 |
| duf3494 domain-containing protein | I4I81_19735 | A0A7D5JNZ7 | Negative | 4123600 - 4125192 | 50519.4 |
| hypothetical protein | I4I81_19740 | Not Available | Positive | 4125571 - 4126080 | 17933.2 |
| hypothetical protein | I4I81_19745 | Not Available | Positive | 4126305 - 4126562 | 9271.12 |
| m1 family metallopeptidase | I4I81_19750 | Q8VZH2 | Negative | 4126569 - 4127981 | 49581.7 |
| atp-dependent clp protease atp-binding subunit | I4I81_19755 | P9WPC6 | Negative | 4127993 - 4128682 | 23593.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
