Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf559 domain-containing protein | I4I81_19660 | P9WLG4 | Negative | 4111356 - 4112225 | 31857.4 |
| nudix domain-containing protein | I4I81_19665 | P9WIY0 | Negative | 4112364 - 4112858 | 17333.7 |
| hamp domain-containing protein | I4I81_19670 | Q02541 | Negative | 4113198 - 4114520 | 45414.1 |
| response regulator transcription factor | I4I81_19675 | P0A5Z7 | Negative | 4114517 - 4115200 | 24167.1 |
| outer membrane lipoprotein carrier protein lola | I4I81_19680 | Not Available | Positive | 4115295 - 4116332 | 34811.3 |
| atp-binding cassette domain-containing protein | I4I81_19685 | P96605 | Positive | 4116329 - 4117306 | 33154.0 |
| abc transporter permease | I4I81_19690 | Not Available | Positive | 4117303 - 4118139 | 27960.5 |
| tryptophan-rich sensory protein | I4I81_19695 | Q8KBX2 | Positive | 4118187 - 4118681 | 17182.2 |
| polyphosphate kinase 2 | I4I81_19700 | O05877 | Positive | 4118694 - 4119500 | 31184.5 |
| serine/threonine-protein phosphatase | I4I81_19705 | P9WLZ6 | Positive | 4119497 - 4120660 | 41973.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
