Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00730 family rossman fold protein | I4I81_19560 | O29139 | Negative | 4091121 - 4091885 | 28110.4 |
| succinyl-diaminopimelate desuccinylase | I4I81_19565 | A0R2G4 | Negative | 4091908 - 4092969 | 37654.4 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | I4I81_19570 | A0R2G5 | Positive | 4093153 - 4094091 | 32286.6 |
| chad domain-containing protein | I4I81_19575 | P9WLH8 | Positive | 4094136 - 4095056 | 33380.2 |
| mfs transporter | I4I81_19580 | P37482 | Negative | 4095046 - 4096248 | 40816.7 |
| succinyldiaminopimelate transaminase | I4I81_19585 | O50434 | Negative | 4096245 - 4097324 | 36974.3 |
| ferredoxin family protein | I4I81_19590 | P24496 | Negative | 4097324 - 4097650 | 11943.9 |
| gnat family n-acetyltransferase | I4I81_19595 | Not Available | Positive | 4097980 - 4098720 | 25642.4 |
| hypothetical protein | I4I81_19600 | Not Available | Negative | 4098722 - 4099450 | 25960.4 |
| hypothetical protein | I4I81_19605 | Not Available | Negative | 4099485 - 4099898 | 13957.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
