Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | I4I81_19160 | P96712 | Positive | 4010113 - 4011459 | 45134.6 |
| exodeoxyribonuclease iii | I4I81_19165 | P0A1B0 | Negative | 4011456 - 4012292 | 30413.7 |
| xylose isomerase | I4I81_19170 | B8HA51 | Positive | 4012348 - 4013532 | 43052.6 |
| xylulose kinase | I4I81_19175 | P12867 | Positive | 4013591 - 4014988 | 46982.4 |
| rok family protein | I4I81_19180 | D2PPN2 | Positive | 4015210 - 4016202 | 33191.9 |
| hypothetical protein | I4I81_19185 | Not Available | Negative | 4016243 - 4016920 | 22349.7 |
| response regulator transcription factor | I4I81_19190 | P0A5Z7 | Positive | 4017038 - 4017700 | 23674.8 |
| hamp domain-containing histidine kinase | I4I81_19195 | A0QBR0 | Positive | 4017697 - 4018968 | 44941.0 |
| potassium channel family protein | I4I81_19200 | P56509 | Negative | 4019123 - 4020124 | 35685.6 |
| hypothetical protein | I4I81_19205 | Not Available | Positive | 4020227 - 4020592 | 12802.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
