Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | I4I81_18810 | A0QTU7 | Negative | 3939835 - 3941406 | 56071.3 |
| llm class flavin-dependent oxidoreductase | I4I81_18815 | Q6F9F6 | Negative | 3941812 - 3942879 | 39035.4 |
| smp-30/gluconolactonase/lre family protein | I4I81_18820 | Q6TLF6 | Positive | 3943085 - 3943975 | 31351.7 |
| flavin reductase family protein | I4I81_18825 | B6CDL6 | Positive | 3944032 - 3944520 | 17470.8 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | I4I81_18830 | P0A5V1 | Positive | 3944525 - 3945568 | 36513.5 |
| mycofactocin-coupled sdr family oxidoreductase | I4I81_18835 | Q9RA05 | Positive | 3945630 - 3946463 | 29433.1 |
| helix-turn-helix domain-containing protein | I4I81_18840 | Q8R890 | Negative | 3947252 - 3948555 | 48958.7 |
| Trna-ala | Not Available | Not Available | Positive | 3948645 - 3948720 | Not Available |
| s9 family peptidase | I4I81_18850 | P39839 | Positive | 3948791 - 3950734 | 69896.5 |
| rida family protein | I4I81_18855 | P40431 | Negative | 3950749 - 3951153 | 14189.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
