Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | I4I81_18760 | P56262 | Negative | 3927757 - 3928467 | 25286.9 |
| 3-carboxyethylcatechol 2,3-dioxygenase | I4I81_18765 | Q0SJD2 | Negative | 3928515 - 3929441 | 33743.2 |
| llm class flavin-dependent oxidoreductase | I4I81_18770 | P55684 | Negative | 3929471 - 3930556 | 40569.6 |
| arac family transcriptional regulator | I4I81_18775 | P43462 | Positive | 3931031 - 3931990 | 34994.9 |
| nad(p)/fad-dependent oxidoreductase | I4I81_18780 | A1IHE6 | Negative | 3932444 - 3934096 | 61658.2 |
| fis family transcriptional regulator | I4I81_18785 | A0QTU7 | Negative | 3934164 - 3935969 | 64148.4 |
| glucose 1-dehydrogenase | I4I81_18790 | Q8GAV9 | Positive | 3936115 - 3936882 | 26490.3 |
| alpha/beta fold hydrolase | I4I81_18795 | Q47L17 | Positive | 3936893 - 3937951 | 38929.8 |
| helix-turn-helix transcriptional regulator | I4I81_18800 | O31480 | Negative | 3938398 - 3938730 | 12179.8 |
| zinc-binding dehydrogenase | I4I81_18805 | O35017 | Positive | 3938855 - 3939820 | 33823.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
