Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | I4I81_18660 | P37769 | Negative | 3878078 - 3878854 | 26154.4 |
| tetr family transcriptional regulator | I4I81_18665 | Q0S7V2 | Negative | 3878851 - 3879495 | 23672.6 |
| rifampin monooxygenase | I4I81_18670 | Q5YTV5 | Negative | 3879617 - 3881047 | 51237.3 |
| s9 family peptidase | I4I81_18675 | V5YMB3 | Positive | 3881404 - 3883293 | 68991.9 |
| sugar phosphate isomerase/epimerase | I4I81_18680 | Q88JU3 | Positive | 3883451 - 3884326 | 30695.1 |
| acyl carrier protein | I4I81_18685 | P45743 | Negative | 3884260 - 3884511 | 8873.46 |
| non-ribosomal peptide synthase/polyketide synthase | I4I81_18690 | Q70LM4 | Negative | 3884526 - 3907838 | 820446.0 |
| amino acid adenylation domain-containing protein | I4I81_18695 | P45745 | Positive | 3907939 - 3914112 | 216110.0 |
| abc transporter substrate-binding protein | I4I81_18700 | P0AEL7 | Negative | 3914189 - 3915202 | 35439.2 |
| siderophore-interacting protein | I4I81_18705 | P9WL30 | Negative | 3915236 - 3917089 | 66272.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
