Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase serb | I4I81_18460 | O53289 | Negative | 3835672 - 3836895 | 42734.4 |
| cytochrome c oxidase subunit i | I4I81_18465 | Q73VC3 | Negative | 3836900 - 3838654 | 65000.5 |
| abc transporter permease | I4I81_18470 | Q5W7C1 | Positive | 3838867 - 3839664 | 26374.8 |
| pig-l family deacetylase | I4I81_18475 | D7BQJ3 | Negative | 3839609 - 3840397 | 28438.8 |
| aaa family atpase | I4I81_18480 | Q9HI16 | Negative | 3840655 - 3842544 | 66743.5 |
| ndma-dependent alcohol dehydrogenase | I4I81_18485 | P9WQB8 | Negative | 3842566 - 3843693 | 39069.6 |
| benzoate-coa ligase family protein | I4I81_18490 | Q8GQN9 | Positive | 3843852 - 3845447 | 56618.6 |
| benzoyl-coa-dihydrodiol lyase | I4I81_18495 | Q84HH6 | Positive | 3845528 - 3847225 | 62625.8 |
| benzoyl-coa 2,3-epoxidase subunit boxb | I4I81_18500 | Q9AIX7 | Positive | 3847222 - 3848640 | 54003.4 |
| duf805 domain-containing protein | I4I81_18505 | P64593 | Positive | 3848728 - 3849147 | 14641.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
