Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenocysteine-specific translation elongation factor | I4I81_18265 | Q46455 | Positive | 3801119 - 3802891 | 62049.5 |
| stas domain-containing protein | I4I81_18270 | Q9WVX8 | Positive | 3802910 - 3803323 | 14348.2 |
| whib family transcriptional regulator | I4I81_18275 | Q7TWJ2 | Positive | 3803466 - 3803759 | 10996.1 |
| dna starvation/stationary phase protection protein | I4I81_18280 | A0R692 | Negative | 3803823 - 3804323 | 18015.2 |
| hypothetical protein | I4I81_18285 | Not Available | Negative | 3804429 - 3805025 | 20617.6 |
| spoiie family protein phosphatase | I4I81_18290 | Q4ZSY3 | Negative | 3805205 - 3807385 | 76951.5 |
| stas domain-containing protein | I4I81_18295 | Q9WVX8 | Positive | 3807546 - 3807953 | 14161.8 |
| atp-binding protein | I4I81_18300 | P9WGX6 | Positive | 3807994 - 3808506 | 17803.7 |
| sigb/sigf/sigg family rna polymerase sigma factor | I4I81_18305 | P9WGI2 | Positive | 3808503 - 3809282 | 28805.2 |
| fad-dependent oxidoreductase | I4I81_18310 | O24679 | Positive | 3809310 - 3810506 | 40079.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
