Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | I4I81_18160 | P39407 | Negative | 3783175 - 3784110 | 32262.7 |
| hypothetical protein | I4I81_18165 | Not Available | Negative | 3784193 - 3784909 | 24507.4 |
| response regulator transcription factor | I4I81_18170 | P54662 | Positive | 3785046 - 3785705 | 23464.2 |
| response regulator transcription factor | I4I81_18175 | P9WGM2 | Positive | 3785712 - 3786089 | 13448.4 |
| hypothetical protein | I4I81_18180 | Not Available | Negative | 3786076 - 3788400 | 78048.5 |
| sensor histidine kinase | I4I81_18185 | Q6GE41 | Negative | 3788397 - 3789953 | 53184.2 |
| abc transporter atp-binding protein | I4I81_18190 | Q82VK1 | Negative | 3789950 - 3790660 | 24568.5 |
| acyl-coa thioesterase | I4I81_18195 | S4TE15 | Negative | 3790778 - 3791212 | 15953.2 |
| acyl-coa thioesterase | I4I81_18200 | Not Available | Positive | 3791232 - 3791645 | 15187.7 |
| duf2795 domain-containing protein | I4I81_18205 | Not Available | Negative | 3791647 - 3791919 | 9636.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
