Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease sbccd subunit d | I4I81_01610 | P23479 | Positive | 328357 - 329511 | 41328.0 |
| smc family atpase | I4I81_01615 | Q9RT44 | Positive | 329508 - 332894 | 117142.0 |
| hypothetical protein | I4I81_01620 | Not Available | Positive | 332905 - 333882 | 34734.5 |
| hypothetical protein | I4I81_01625 | Not Available | Positive | 333879 - 337388 | 121280.0 |
| duf3558 family protein | I4I81_01630 | Not Available | Positive | 337457 - 337912 | 14659.5 |
| exodeoxyribonuclease v subunit alpha | I4I81_01635 | A0QS28 | Negative | 337914 - 339698 | 62989.3 |
| uvrd-helicase domain-containing protein | I4I81_01640 | A0QS29 | Negative | 339716 - 345259 | 196898.0 |
| hypothetical protein | I4I81_01645 | Not Available | Positive | 346434 - 346931 | 17822.2 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | I4I81_01650 | P38569 | Positive | 347458 - 349083 | 56854.4 |
| helix-turn-helix domain-containing protein | I4I81_01655 | Q7TZN3 | Positive | 349102 - 349911 | 29002.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
