Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4097 family beta strand repeat protein | I4I81_15510 | Not Available | Positive | 3227472 - 3228320 | 29526.6 |
| atp-binding cassette domain-containing protein | I4I81_15515 | P32010 | Positive | 3228332 - 3229240 | 31899.1 |
| abc transporter permease | I4I81_15520 | P32011 | Positive | 3229237 - 3230034 | 27244.9 |
| voc family protein | I4I81_15525 | Not Available | Positive | 3230093 - 3230557 | 16732.7 |
| duf899 domain-containing protein | I4I81_15530 | Not Available | Negative | 3230567 - 3231280 | 27052.4 |
| sigma-70 family rna polymerase sigma factor | I4I81_15535 | P9WGG4 | Positive | 3231417 - 3232364 | 34809.5 |
| hypothetical protein | I4I81_15540 | Not Available | Positive | 3232548 - 3232769 | 7635.16 |
| fpg/nei family dna glycosylase | I4I81_15545 | P64159 | Negative | 3232939 - 3233751 | 30172.2 |
| ribose-5-phosphate isomerase | I4I81_15550 | Q73XM4 | Negative | 3233751 - 3234221 | 16884.8 |
| duf429 domain-containing protein | I4I81_15555 | Not Available | Positive | 3234238 - 3234906 | 22657.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
