Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | I4I81_15460 | O27383 | Positive | 3219263 - 3219871 | 22521.7 |
| divalent-cation tolerance protein cuta | I4I81_15465 | Q7SIA8 | Positive | 3219868 - 3220218 | 13047.5 |
| hypothetical protein | I4I81_15470 | Not Available | Negative | 3220237 - 3220581 | 12491.0 |
| hypothetical protein | I4I81_15475 | Not Available | Negative | 3220847 - 3222133 | 48559.6 |
| cold shock domain-containing protein | I4I81_15480 | P62169 | Positive | 3222742 - 3222960 | 8191.46 |
| helix-turn-helix domain-containing protein | I4I81_15485 | Not Available | Negative | 3222969 - 3223663 | 24567.1 |
| nuclear transport factor 2 family protein | I4I81_15490 | Not Available | Positive | 3223550 - 3223912 | 13471.9 |
| hypothetical protein | I4I81_15495 | Not Available | Positive | 3223952 - 3224344 | 14155.9 |
| aaa family atpase | I4I81_15500 | O32215 | Positive | 3224734 - 3226878 | 78213.4 |
| toxin-antitoxin system hicb family antitoxin | I4I81_15505 | Not Available | Positive | 3226933 - 3227421 | 17021.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
