Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vtt domain-containing protein | I4I81_15360 | Not Available | Negative | 3205050 - 3205871 | 28109.4 |
| anti-sigma factor antagonist | I4I81_15365 | Q9WVX8 | Positive | 3206017 - 3206352 | 11794.0 |
| atp-binding protein | I4I81_15370 | P9WLZ6 | Positive | 3206399 - 3206875 | 17204.5 |
| hypothetical protein | I4I81_15375 | Not Available | Positive | 3207096 - 3207590 | 17876.2 |
| dodecin family protein | I4I81_15380 | A1WUH0 | Negative | 3207606 - 3207815 | 7695.1 |
| alpha-amylase family protein | I4I81_15385 | A0A7U9P668 | Negative | 3207852 - 3209096 | 46132.0 |
| iclr family transcriptional regulator | I4I81_15390 | P77300 | Positive | 3209095 - 3209877 | 27502.4 |
| mfs transporter | I4I81_15395 | O32859 | Negative | 3209881 - 3211146 | 41984.4 |
| merr family transcriptional regulator | I4I81_15400 | P0A4T8 | Positive | 3211820 - 3212566 | 26746.7 |
| hypothetical protein | I4I81_15405 | Not Available | Positive | 3212732 - 3213013 | 10152.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
