Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | I4I81_15010 | A1TC01 | Negative | 3131868 - 3132494 | 22390.7 |
| ribosome silencing factor | I4I81_15015 | Q9KD89 | Negative | 3132491 - 3132877 | 14127.7 |
| atp-binding protein | I4I81_15020 | Not Available | Negative | 3133051 - 3133860 | 29305.1 |
| nicotinate-nucleotide adenylyltransferase | I4I81_15025 | Q8FN90 | Negative | 3133857 - 3134453 | 21665.8 |
| alpha-ketoglutarate-dependent dioxygenase alkb | I4I81_15030 | Q96Q83 | Negative | 3134468 - 3135103 | 22929.4 |
| m20/m25/m40 family metallo-hydrolase | I4I81_15035 | Q02PA2 | Negative | 3135276 - 3136700 | 48133.1 |
| vwa domain-containing protein | I4I81_15040 | Not Available | Negative | 3136747 - 3138189 | 52806.2 |
| response regulator transcription factor | I4I81_15045 | A0QTK2 | Positive | 3138257 - 3138949 | 24839.1 |
| hamp domain-containing protein | I4I81_15050 | P30847 | Positive | 3138949 - 3139935 | 35206.5 |
| duf4173 domain-containing protein | I4I81_15055 | Not Available | Positive | 3139932 - 3141404 | 50230.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
