Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase family protein | I4I81_14960 | Q49757 | Negative | 3119806 - 3120648 | 31367.8 |
| alpha-e domain-containing protein | I4I81_14965 | P9WL96 | Negative | 3120648 - 3121592 | 35047.6 |
| circularly permuted type 2 atp-grasp protein | I4I81_14970 | P9WLA8 | Negative | 3121592 - 3123298 | 62054.5 |
| 30s ribosomal protein s20 | I4I81_14975 | Q9RDM3 | Positive | 3123491 - 3123754 | 9404.4 |
| dna polymerase iii subunit delta | I4I81_14980 | P71730 | Negative | 3123890 - 3124855 | 33344.1 |
| threonine synthase | I4I81_14985 | Q58860 | Positive | 3125103 - 3126371 | 44592.9 |
| comec/rec2 family competence protein | I4I81_14990 | P39695 | Negative | 3126274 - 3128709 | 81495.5 |
| helix-hairpin-helix domain-containing protein | I4I81_14995 | P39694 | Negative | 3128706 - 3129680 | 32677.9 |
| degv family protein | I4I81_15000 | Q9RDL7 | Negative | 3130264 - 3131127 | 29534.6 |
| sgnh/gdsl hydrolase family protein | I4I81_15005 | A0R109 | Negative | 3131137 - 3131871 | 25831.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
