Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | I4I81_14410 | P25256 | Positive | 3004119 - 3005768 | 58641.6 |
| mate family efflux transporter | I4I81_14415 | Q84K71 | Negative | 3005829 - 3007205 | 47148.6 |
| methyltransferase domain-containing protein | I4I81_14420 | L0D9B6 | Negative | 3007151 - 3007687 | 18796.8 |
| dhh family phosphoesterase | I4I81_14425 | P71615 | Negative | 3007761 - 3008744 | 33785.6 |
| 30s ribosome-binding factor rbfa | I4I81_14430 | Q5YSC8 | Negative | 3008838 - 3009296 | 16410.3 |
| duf503 domain-containing protein | I4I81_14435 | P32730 | Negative | 3009306 - 3009602 | 11066.3 |
| translation initiation factor if-2 | I4I81_14440 | Q5YSC6 | Negative | 3009661 - 3012750 | 105982.0 |
| ylxr family protein | I4I81_14445 | Not Available | Negative | 3012844 - 3013140 | 10825.9 |
| transcription termination/antitermination protein nusa | I4I81_14450 | P0A5M3 | Negative | 3013257 - 3014294 | 37056.0 |
| ribosome maturation factor rimp | I4I81_14455 | A4FM36 | Negative | 3014291 - 3014872 | 20710.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
