Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03085 family protein | I4I81_14310 | Not Available | Negative | 2983750 - 2984376 | 22485.9 |
| endonuclease/exonuclease/phosphatase family protein | I4I81_14315 | Not Available | Negative | 2984378 - 2985337 | 32876.5 |
| fad-dependent thymidylate synthase | I4I81_14320 | A1T7Q0 | Negative | 2985367 - 2986119 | 27833.8 |
| toxin-antitoxin system hicb family antitoxin | I4I81_14325 | Not Available | Positive | 2986208 - 2986717 | 17449.4 |
| helix-turn-helix domain-containing protein | I4I81_14330 | Not Available | Positive | 2987411 - 2987494 | 2529.88 |
| ycaq family dna glycosylase | I4I81_14335 | P75843 | Negative | 2987669 - 2988895 | 45146.3 |
| eama family transporter | I4I81_14340 | P0AA72 | Negative | 2988943 - 2989863 | 31066.6 |
| gnat family n-acetyltransferase | I4I81_14345 | Not Available | Positive | 2989981 - 2990517 | 18609.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | I4I81_14350 | Q5YSW2 | Negative | 2990594 - 2991331 | 25535.7 |
| duf456 domain-containing protein | I4I81_14355 | Not Available | Negative | 2991336 - 2991800 | 15538.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
