Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | I4I81_14260 | Q87HV6 | Negative | 2969740 - 2970552 | 29926.2 |
| dna translocase ftsk 4tm domain-containing protein | I4I81_14265 | P9WNA2 | Negative | 2970678 - 2973218 | 89899.8 |
| hypothetical protein | I4I81_14270 | Not Available | Negative | 2973289 - 2975070 | 57660.1 |
| hypothetical protein | I4I81_14275 | Not Available | Negative | 2975054 - 2976889 | 64874.2 |
| lrp/asnc family transcriptional regulator | I4I81_14280 | Q8U0P3 | Negative | 2977314 - 2977754 | 16106.5 |
| l-lysine 6-transaminase | I4I81_14285 | P63510 | Positive | 2977836 - 2979140 | 46328.3 |
| hypothetical protein | I4I81_14290 | Not Available | Negative | 2979196 - 2979435 | 8078.61 |
| fad-dependent oxidoreductase | I4I81_14295 | P44732 | Negative | 2979564 - 2980880 | 46168.9 |
| ribonuclease j | I4I81_14300 | A0QVT2 | Negative | 2980880 - 2982667 | 63988.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | I4I81_14305 | A4TCJ3 | Negative | 2982704 - 2983702 | 34568.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
