Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate abc transporter substrate-binding protein | I4I81_14010 | Q8RQL6 | Positive | 2921023 - 2921919 | 30904.4 |
| amino acid abc transporter permease | I4I81_14015 | O34671 | Positive | 2921984 - 2922649 | 23166.8 |
| amino acid abc transporter permease | I4I81_14020 | P48245 | Positive | 2922646 - 2923548 | 31806.2 |
| hypothetical protein | I4I81_14025 | Not Available | Positive | 2923687 - 2924133 | 15243.0 |
| s9 family peptidase | I4I81_14030 | V5YMB3 | Negative | 2924169 - 2926112 | 68900.6 |
| hypothetical protein | I4I81_14035 | Not Available | Negative | 2926123 - 2926437 | 11202.7 |
| hypothetical protein | I4I81_14040 | Not Available | Negative | 2926434 - 2926946 | 17802.2 |
| hypothetical protein | I4I81_14045 | Not Available | Negative | 2927001 - 2927147 | 4666.85 |
| hypothetical protein | I4I81_14050 | Not Available | Negative | 2927156 - 2927902 | 25670.2 |
| hypothetical protein | I4I81_14055 | Not Available | Negative | 2927899 - 2928393 | 17127.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
