Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketoacyl-acp synthase iii | I4I81_13860 | Q9ZBV4 | Positive | 2891568 - 2892572 | 34736.4 |
| acyl carrier protein | I4I81_13865 | P61156 | Positive | 2892601 - 2892843 | 8516.88 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | I4I81_13870 | P63455 | Positive | 2892840 - 2894105 | 43290.7 |
| hypothetical protein | I4I81_13875 | Not Available | Negative | 2894113 - 2894661 | 19355.0 |
| duf3145 domain-containing protein | I4I81_13880 | Not Available | Negative | 2894695 - 2895183 | 17211.3 |
| hypothetical protein | I4I81_13885 | Not Available | Negative | 2895367 - 2896218 | 28601.1 |
| mbl fold metallo-hydrolase | I4I81_13890 | P54553 | Negative | 2896284 - 2897315 | 37187.0 |
| helix-turn-helix domain-containing protein | I4I81_13895 | P9WKT6 | Positive | 2897517 - 2897720 | 7525.18 |
| transglutaminase family protein | I4I81_13900 | Q49757 | Positive | 2897776 - 2898570 | 28504.8 |
| alpha/beta hydrolase | I4I81_13905 | P9WNH2 | Positive | 2898608 - 2899570 | 34461.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
