Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | I4I81_13810 | P9WLN6 | Positive | 2881342 - 2882748 | 51571.2 |
| hypothetical protein | I4I81_13815 | Not Available | Positive | 2882829 - 2883872 | 37561.6 |
| Trna-val | Not Available | Not Available | Positive | 2883988 - 2884059 | Not Available |
| peroxiredoxin | I4I81_13825 | P65689 | Negative | 2884091 - 2884549 | 16481.2 |
| duf3052 domain-containing protein | I4I81_13830 | P9WLG8 | Negative | 2884620 - 2885054 | 15100.5 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | I4I81_13835 | P9WIS8 | Positive | 2885173 - 2887995 | 104106.0 |
| cold-shock protein | I4I81_13840 | P48859 | Positive | 2888250 - 2888456 | 7324.46 |
| pirin family protein | I4I81_13845 | P9WI84 | Negative | 2888525 - 2889274 | 26335.9 |
| helix-turn-helix domain-containing protein | I4I81_13850 | P9WPH4 | Positive | 2889343 - 2890560 | 43140.8 |
| acp s-malonyltransferase | I4I81_13855 | P63459 | Positive | 2890663 - 2891571 | 30397.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
