Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase lipb | I4I81_13310 | A3Q1S7 | Positive | 2784137 - 2784877 | 26375.5 |
| serine hydrolase | I4I81_13315 | Not Available | Positive | 2784917 - 2786092 | 38691.8 |
| helix-turn-helix transcriptional regulator | I4I81_13320 | Not Available | Positive | 2786106 - 2786564 | 15738.7 |
| hypothetical protein | I4I81_13325 | Not Available | Negative | 2786561 - 2786755 | 6385.08 |
| llm class f420-dependent oxidoreductase | I4I81_13330 | E8NCH3 | Negative | 2786756 - 2787688 | 33650.7 |
| sdr family nad(p)-dependent oxidoreductase | I4I81_13335 | Q8VBZ0 | Positive | 2787706 - 2788623 | 31516.6 |
| lipoyl synthase | I4I81_13340 | A4FA70 | Positive | 2788633 - 2789637 | 37396.5 |
| 3-carboxy-cis,cis-muconate cycloisomerase | I4I81_13345 | K4R6W4 | Negative | 2789720 - 2790829 | 36992.5 |
| cytochrome p450 | I4I81_13350 | C4B644 | Negative | 2791024 - 2792220 | 43380.7 |
| fad-binding oxidoreductase | I4I81_13355 | Q9HXE3 | Negative | 2792246 - 2793340 | 37259.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
