Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | I4I81_13110 | Q0S539 | Positive | 2745341 - 2746978 | 59189.9 |
| phosphatase pap2 family protein | I4I81_13115 | O34349 | Positive | 2746975 - 2747664 | 24173.7 |
| tetr/acrr family transcriptional regulator | I4I81_13120 | O34619 | Negative | 2747654 - 2748175 | 18115.7 |
| pyridoxamine 5'-phosphate oxidase family protein | I4I81_13125 | Not Available | Positive | 2748222 - 2748827 | 22189.4 |
| cupin domain-containing protein | I4I81_13130 | P16558 | Positive | 2749015 - 2749425 | 15042.6 |
| formamidopyrimidine-dna glycosylase | I4I81_13135 | A1SLU7 | Negative | 2749422 - 2750216 | 28831.2 |
| redoxin domain-containing protein | I4I81_13140 | Q8VZ10 | Positive | 2750283 - 2752037 | 61895.3 |
| helix-turn-helix domain-containing protein | I4I81_13145 | Q47151 | Negative | 2752883 - 2753458 | 19792.6 |
| response regulator transcription factor | I4I81_13150 | P54662 | Negative | 2753514 - 2754155 | 22615.3 |
| sensor domain-containing protein | I4I81_13155 | O32198 | Negative | 2754156 - 2755469 | 45990.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
