Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix transcriptional regulator | I4I81_13010 | P42103 | Positive | 2729187 - 2729672 | 18031.6 |
| 5,6-dimethylbenzimidazole synthase | I4I81_13015 | Q92PC8 | Negative | 2729767 - 2730390 | 22995.5 |
| mfs transporter | I4I81_13020 | A0LNN5 | Negative | 2730356 - 2731555 | 40717.2 |
| gntr family transcriptional regulator | I4I81_13025 | A0QQ72 | Negative | 2731594 - 2732355 | 27593.2 |
| hypothetical protein | I4I81_13030 | Not Available | Negative | 2732518 - 2732895 | 12520.2 |
| type b 50s ribosomal protein l31 | I4I81_13035 | A4F7S3 | Positive | 2732949 - 2733197 | 9291.84 |
| metallophosphoesterase | I4I81_13040 | I6YEE1 | Negative | 2733378 - 2734271 | 33346.6 |
| cytochrome p450 | I4I81_13045 | P63722 | Positive | 2734364 - 2735668 | 46860.4 |
| ppox class f420-dependent oxidoreductase | I4I81_13050 | Not Available | Positive | 2735665 - 2736039 | 12934.8 |
| winged helix-turn-helix transcriptional regulator | I4I81_13055 | Not Available | Negative | 2736354 - 2736791 | 15908.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
