Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | I4I81_12960 | Q69TY4 | Positive | 2721942 - 2722427 | 16448.4 |
| helix-turn-helix domain-containing protein | I4I81_12965 | Q5W252 | Negative | 2722438 - 2722876 | 15272.4 |
| helix-turn-helix domain-containing protein | I4I81_12970 | Q1RH78 | Positive | 2722830 - 2723096 | 8816.45 |
| vanz family protein | I4I81_12975 | Not Available | Negative | 2723097 - 2723294 | 6424.05 |
| hypothetical protein | I4I81_12980 | Not Available | Positive | 2723330 - 2723806 | 17121.6 |
| hypothetical protein | I4I81_12985 | G3XGC1 | Positive | 2723697 - 2725463 | 63524.2 |
| alcohol dehydrogenase catalytic domain-containing protein | I4I81_12990 | Q0KDL6 | Negative | 2725485 - 2726528 | 36082.4 |
| alpha/beta hydrolase | I4I81_12995 | O31158 | Negative | 2726666 - 2727475 | 28892.2 |
| hypothetical protein | I4I81_13000 | Not Available | Positive | 2727543 - 2727746 | 7710.25 |
| mfs transporter | I4I81_13005 | P39886 | Negative | 2727765 - 2729117 | 45359.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
