Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I4I81_01160 | Not Available | Negative | 230381 - 231826 | 49791.7 |
| gpp34 family phosphoprotein | I4I81_01165 | Not Available | Positive | 231885 - 232499 | 22041.5 |
| trimeric intracellular cation channel family protein | I4I81_01170 | O86576 | Negative | 232565 - 233158 | 20125.5 |
| cobalamin-binding protein | I4I81_01175 | C6DC28 | Negative | 233223 - 233975 | 26528.5 |
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | I4I81_01180 | Q7N4V8 | Positive | 234110 - 234439 | 11744.9 |
| fad-dependent oxidoreductase | I4I81_01185 | Q9AGP8 | Positive | 234436 - 236823 | 85621.8 |
| n-methyl-l-tryptophan oxidase | I4I81_01190 | P40854 | Positive | 236861 - 237982 | 40092.4 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | I4I81_01195 | P0ABR8 | Positive | 237910 - 239079 | 43333.3 |
| hypothetical protein | I4I81_01200 | P9WLG4 | Positive | 239352 - 240056 | 26144.6 |
| iclr family transcriptional regulator | I4I81_01205 | Q765S0 | Negative | 240107 - 240883 | 27323.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
