Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i glyceraldehyde-3-phosphate dehydrogenase | I4I81_12810 | Q82IZ2 | Positive | 2694565 - 2695581 | 36450.3 |
| pyridoxamine 5'-phosphate oxidase family protein | I4I81_12815 | P9WMA4 | Positive | 2695578 - 2696054 | 16448.5 |
| shoct domain-containing protein | I4I81_12820 | Not Available | Negative | 2696309 - 2696572 | 9693.93 |
| universal stress protein | I4I81_12825 | P9WN14 | Negative | 2696597 - 2697031 | 14764.3 |
| aaa family atpase | I4I81_12830 | Q5FQ97 | Positive | 2697220 - 2697696 | 16616.7 |
| universal stress protein | I4I81_12835 | P9WLP0 | Positive | 2697816 - 2698283 | 15656.8 |
| cbs domain-containing protein | I4I81_12840 | Q58821 | Positive | 2698280 - 2698864 | 20668.7 |
| cation:proton antiporter | I4I81_12845 | O31615 | Positive | 2698972 - 2700129 | 38846.0 |
| hypothetical protein | I4I81_12850 | Not Available | Negative | 2700523 - 2700777 | 8366.22 |
| universal stress protein | I4I81_12855 | P9WLN0 | Negative | 2700774 - 2701640 | 29623.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
