Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | I4I81_12660 | Not Available | Positive | 2663925 - 2667062 | 112575.0 |
| prepilin peptidase | I4I81_12665 | Not Available | Positive | 2667169 - 2667693 | 17382.8 |
| hypothetical protein | I4I81_12670 | Not Available | Negative | 2667683 - 2668576 | 31184.7 |
| hypothetical protein | I4I81_12675 | Not Available | Negative | 2668573 - 2669220 | 23052.6 |
| hypothetical protein | I4I81_12680 | Not Available | Negative | 2669217 - 2670614 | 49861.5 |
| hypothetical protein | I4I81_12685 | Not Available | Negative | 2671195 - 2671413 | 7958.69 |
| helix-turn-helix domain-containing protein | I4I81_12690 | P22876 | Positive | 2672040 - 2672234 | 7502.02 |
| site-specific integrase | I4I81_12695 | Q8R890 | Positive | 2672231 - 2673457 | 45948.5 |
| duf4263 domain-containing protein | I4I81_12700 | B7HFR2 | Negative | 2673815 - 2675065 | 46458.5 |
| Trna-val | Not Available | Not Available | Positive | 2675541 - 2675612 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
