Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zf-hc2 domain-containing protein | I4I81_12310 | Not Available | Positive | 2599112 - 2599378 | 9890.77 |
| nadh-quinone oxidoreductase subunit nuoh | I4I81_12315 | A4FPT4 | Positive | 2599468 - 2600736 | 45859.0 |
| tvp38/tmem64 family protein | I4I81_12320 | P9WFS2 | Negative | 2600831 - 2601517 | 22798.8 |
| merr family dna-binding protein | I4I81_12325 | P58379 | Positive | 2601846 - 2602277 | 15688.9 |
| cysteine hydrolase | I4I81_12330 | Q4ZXR8 | Positive | 2602314 - 2603039 | 25897.5 |
| shoct domain-containing protein | I4I81_12335 | Not Available | Positive | 2603098 - 2603355 | 9533.81 |
| helix-turn-helix domain-containing protein | I4I81_12340 | O06652 | Positive | 2603438 - 2603953 | 18288.8 |
| hypothetical protein | I4I81_12345 | Q59168 | Positive | 2604007 - 2604327 | 11487.8 |
| flavodoxin family protein | I4I81_12350 | O69443 | Negative | 2604347 - 2605057 | 25337.9 |
| duf3179 domain-containing protein | I4I81_12355 | Not Available | Negative | 2605072 - 2606259 | 41985.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
