Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | I4I81_12260 | P30343 | Positive | 2589133 - 2589687 | 19174.5 |
| cytochrome c biogenesis protein | I4I81_12265 | P30344 | Positive | 2589684 - 2590550 | 28903.8 |
| mfs transporter | I4I81_12270 | Q58713 | Negative | 2591544 - 2592788 | 42050.8 |
| gntr family transcriptional regulator | I4I81_12275 | O32207 | Positive | 2592944 - 2593936 | 34491.2 |
| is256 family transposase | I4I81_12280 | P80011 | Negative | 2594021 - 2595286 | 46979.2 |
| nad(p)/fad-dependent oxidoreductase | I4I81_12285 | P0A0E5 | Positive | 2595701 - 2597104 | 48834.7 |
| duf427 domain-containing protein | I4I81_12290 | Not Available | Negative | 2597148 - 2597438 | 10510.6 |
| helix-turn-helix domain-containing protein | I4I81_12295 | P9WN16 | Negative | 2597841 - 2598092 | 8926.68 |
| nitrate/nitrite transporter nrts | I4I81_12300 | Not Available | Negative | 2598183 - 2598437 | 8625.59 |
| sigma-70 family rna polymerase sigma factor | I4I81_12305 | Q7AKG9 | Positive | 2598525 - 2599115 | 21460.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
