Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | I4I81_12110 | P76224 | Negative | 2567061 - 2567948 | 30824.3 |
| abc transporter substrate-binding protein | I4I81_12115 | P76223 | Negative | 2567960 - 2569180 | 42421.5 |
| tvp38/tmem64 family protein | I4I81_12120 | P9WFS2 | Positive | 2569359 - 2570015 | 22456.2 |
| cdp-alcohol phosphatidyltransferase family protein | I4I81_12125 | P76226 | Positive | 2570015 - 2570641 | 21516.0 |
| fad-dependent oxidoreductase | I4I81_12130 | P30341 | Negative | 2570623 - 2572086 | 50326.6 |
| radical sam domain-containing protein | I4I81_12135 | Not Available | Negative | 2572083 - 2573486 | 52393.0 |
| srpbcc family protein | I4I81_12140 | Not Available | Negative | 2573564 - 2573959 | 13919.3 |
| haloacid dehalogenase type ii | I4I81_12145 | Q59666 | Negative | 2573998 - 2574672 | 24497.3 |
| crp/fnr family transcriptional regulator | I4I81_12150 | P9WMH4 | Positive | 2574805 - 2575551 | 26139.6 |
| carboxymuconolactone decarboxylase family protein | I4I81_12155 | Not Available | Positive | 2575645 - 2576187 | 19084.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
