Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf932 domain-containing protein | I4I81_12010 | Not Available | Negative | 2544668 - 2545816 | 40712.6 |
| hypothetical protein | I4I81_12015 | Not Available | Positive | 2546426 - 2546737 | 11566.5 |
| helix-turn-helix domain-containing protein | I4I81_12020 | P22876 | Positive | 2546804 - 2547061 | 9416.19 |
| site-specific integrase | I4I81_12025 | P15435 | Positive | 2547045 - 2548271 | 44746.2 |
| hypothetical protein | I4I81_12030 | B9L5K2 | Negative | 2548593 - 2549399 | 29386.3 |
| dna-protecting protein dpra | I4I81_12035 | Q8DPI7 | Negative | 2549396 - 2550382 | 35422.4 |
| hypothetical protein | I4I81_12040 | Not Available | Negative | 2550903 - 2551124 | 7996.48 |
| bifunctional dna primase/polymerase | I4I81_12045 | Not Available | Negative | 2551511 - 2552620 | 39080.1 |
| single-stranded dna-binding protein | I4I81_12050 | P0A611 | Negative | 2552666 - 2553154 | 17374.2 |
| is21 family transposase | I4I81_12055 | Q46087 | Positive | 2553866 - 2555395 | 55753.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
