Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | I4I81_11910 | P75849 | Negative | 2526710 - 2527378 | 23472.7 |
| citryl-coa lyase | I4I81_11915 | Q54YA0 | Negative | 2527375 - 2528166 | 27642.1 |
| voc family protein | I4I81_11920 | A4IS40 | Negative | 2528172 - 2528669 | 18126.0 |
| gntr family transcriptional regulator | I4I81_11925 | P70790 | Positive | 2529016 - 2529705 | 25518.3 |
| acyl-coa dehydrogenase | I4I81_11930 | A1IIX2 | Positive | 2530203 - 2531402 | 43237.4 |
| ester cyclase | I4I81_11935 | Not Available | Positive | 2531399 - 2531833 | 15522.3 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | I4I81_11940 | Not Available | Positive | 2531860 - 2532699 | 31613.3 |
| acyl-coa dehydrogenase family protein | I4I81_11945 | Q0S811 | Positive | 2532786 - 2533997 | 43314.0 |
| nuclear transport factor 2 family protein | I4I81_11950 | Not Available | Positive | 2534011 - 2534388 | 14061.6 |
| helix-turn-helix domain-containing protein | I4I81_11955 | O07610 | Positive | 2534427 - 2535908 | 53535.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
