Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | I4I81_01060 | O06417 | Positive | 211044 - 212573 | 53715.4 |
| helix-turn-helix domain-containing protein | I4I81_01065 | Not Available | Positive | 212691 - 212860 | 6071.1 |
| uma2 family endonuclease | I4I81_01070 | Not Available | Positive | 213271 - 213591 | 11379.3 |
| hypothetical protein | I4I81_01075 | Not Available | Negative | 213588 - 214121 | 17875.7 |
| geranylgeranyl reductase family protein | I4I81_01080 | A0QRI8 | Negative | 214181 - 215449 | 44607.3 |
| acyl-coa desaturase | I4I81_01085 | P9WNZ2 | Negative | 215791 - 216990 | 44897.2 |
| ferredoxin reductase | I4I81_01090 | P9WNE8 | Negative | 216987 - 218006 | 36354.4 |
| merr family transcriptional regulator | I4I81_01095 | P13111 | Positive | 218070 - 218837 | 28661.4 |
| threonine ammonia-lyase ilva | I4I81_01100 | P66898 | Negative | 219062 - 220309 | 43267.6 |
| hypothetical protein | I4I81_01105 | Not Available | Positive | 220419 - 220667 | 8808.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
