Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saf domain-containing protein | I4I81_11810 | Not Available | Positive | 2509522 - 2510142 | 21173.8 |
| hypothetical protein | I4I81_11815 | P9WKX6 | Positive | 2510148 - 2510891 | 25832.1 |
| cpaf family protein | I4I81_11820 | P9WMT2 | Positive | 2511074 - 2512252 | 42101.7 |
| type ii secretion system f family protein | I4I81_11825 | Not Available | Positive | 2512249 - 2513142 | 30605.6 |
| type ii secretion system f family protein | I4I81_11830 | Not Available | Positive | 2513139 - 2514017 | 30320.6 |
| hypothetical protein | I4I81_11835 | Not Available | Positive | 2514034 - 2514237 | 7097.47 |
| pilus assembly protein | I4I81_11840 | Not Available | Positive | 2514244 - 2514621 | 13063.9 |
| pilus assembly protein tade | I4I81_11845 | Not Available | Positive | 2514630 - 2515058 | 14587.1 |
| hypothetical protein | I4I81_11850 | Not Available | Positive | 2515055 - 2515474 | 13798.6 |
| lysm peptidoglycan-binding domain-containing protein | I4I81_11855 | Not Available | Positive | 2515519 - 2518470 | 105153.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
