Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal transporter | I4I81_11710 | Not Available | Positive | 2486177 - 2487268 | 38299.9 |
| mfs transporter | I4I81_11715 | A0R5K5 | Positive | 2487737 - 2489323 | 53503.6 |
| atp-dependent helicase | I4I81_11720 | Q9CD72 | Negative | 2489442 - 2491187 | 62534.4 |
| aaa family atpase | I4I81_11725 | E8PLM2 | Negative | 2491184 - 2492878 | 60654.2 |
| helix-turn-helix domain-containing protein | I4I81_11730 | Not Available | Negative | 2494649 - 2495664 | 35884.1 |
| helix-turn-helix domain-containing protein | I4I81_11735 | P59801 | Positive | 2495721 - 2496984 | 44524.0 |
| helix-turn-helix domain-containing protein | I4I81_11740 | P60231 | Positive | 2497022 - 2497448 | 16151.4 |
| hypothetical protein | I4I81_11745 | Not Available | Positive | 2497839 - 2498273 | 15395.9 |
| hypothetical protein | I4I81_11750 | Not Available | Positive | 2498276 - 2498548 | 9104.47 |
| hypothetical protein | I4I81_11755 | Not Available | Positive | 2498545 - 2499132 | 19991.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
