Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2933 domain-containing protein | I4I81_11610 | Not Available | Positive | 2467572 - 2467853 | 9958.22 |
| shoct domain-containing protein | I4I81_11615 | Not Available | Positive | 2467850 - 2468116 | 10042.2 |
| duf302 domain-containing protein | I4I81_11620 | Not Available | Positive | 2468238 - 2468633 | 14343.5 |
| shoct domain-containing protein | I4I81_11625 | Not Available | Positive | 2468710 - 2468925 | 8266.11 |
| multicopper oxidase family protein | I4I81_11630 | Q4LAB0 | Positive | 2468922 - 2470409 | 51384.3 |
| fkbm family methyltransferase | I4I81_11635 | P55473 | Negative | 2470535 - 2471371 | 30240.2 |
| asparagine synthase (glutamine-hydrolyzing) | I4I81_11640 | P64248 | Negative | 2471446 - 2473386 | 71115.3 |
| hypothetical protein | I4I81_11645 | Not Available | Negative | 2473564 - 2474130 | 19467.6 |
| hamp domain-containing histidine kinase | I4I81_11650 | O69729 | Negative | 2474177 - 2475472 | 45628.4 |
| hypothetical protein | I4I81_11655 | Not Available | Positive | 2475726 - 2476679 | 34865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
