Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | I4I81_11410 | P15435 | Positive | 2414751 - 2415257 | 17873.0 |
| hypothetical protein | I4I81_11415 | P0AFU4 | Positive | 2415488 - 2415757 | 9491.11 |
| duf87 domain-containing protein | I4I81_11420 | Q58824 | Negative | 2415987 - 2420957 | 177565.0 |
| hypothetical protein | I4I81_11425 | Not Available | Negative | 2420954 - 2422609 | 60085.8 |
| protein kinase | I4I81_11430 | Q81WH6 | Negative | 2422606 - 2426400 | 137380.0 |
| terd family protein | I4I81_11435 | Q52357 | Positive | 2426658 - 2428478 | 63814.9 |
| dead/deah box helicase | I4I81_11440 | P75093 | Negative | 2428821 - 2431019 | 79487.9 |
| hypothetical protein | I4I81_11445 | Not Available | Negative | 2431096 - 2431593 | 17987.0 |
| is256 family transposase | I4I81_11450 | P35883 | Positive | 2431971 - 2433251 | 46983.2 |
| hypothetical protein | I4I81_11455 | Not Available | Negative | 2435704 - 2436018 | 10403.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
