Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | I4I81_11360 | O59816 | Negative | 2406643 - 2406793 | 5744.02 |
| fcd domain-containing protein | I4I81_11365 | Not Available | Positive | 2406823 - 2407110 | 10234.8 |
| fad-dependent oxidoreductase | I4I81_11370 | P9WJJ0 | Positive | 2407201 - 2408268 | 37483.6 |
| fad-dependent oxidoreductase | I4I81_11375 | P9WJJ0 | Positive | 2408858 - 2410081 | 42329.4 |
| iclr family transcriptional regulator | I4I81_11380 | P77300 | Positive | 2410791 - 2411549 | 26982.0 |
| 2,4'-dihydroxyacetophenone dioxygenase family protein | I4I81_11385 | Not Available | Positive | 2411778 - 2412284 | 18969.0 |
| plp-dependent transferase | I4I81_11390 | P94890 | Negative | 2412224 - 2412595 | 13126.3 |
| 2-oxoglutarate and iron-dependent oxygenase domain-containing protein | I4I81_11395 | Q84MB6 | Negative | 2412606 - 2413034 | 15441.3 |
| tetr family transcriptional regulator | I4I81_11400 | Not Available | Negative | 2413262 - 2413822 | 18903.9 |
| llm class flavin-dependent oxidoreductase | I4I81_11405 | O29196 | Positive | 2413910 - 2414854 | 32535.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
