Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | I4I81_10260 | Not Available | Positive | 2162719 - 2163616 | 32438.8 |
| hypothetical protein | I4I81_10265 | Not Available | Positive | 2163710 - 2164969 | 40308.6 |
| hypothetical protein | I4I81_10270 | Not Available | Positive | 2165001 - 2165369 | 12104.8 |
| duf1446 domain-containing protein | I4I81_10275 | Not Available | Negative | 2165379 - 2167088 | 59261.7 |
| dna polymerase iv | I4I81_10280 | Q98JM5 | Positive | 2167140 - 2168366 | 43941.4 |
| paai family thioesterase | I4I81_10285 | Not Available | Negative | 2168636 - 2169046 | 14000.0 |
| maltose alpha-d-glucosyltransferase | I4I81_10290 | Not Available | Positive | 2169398 - 2171608 | 80184.4 |
| hypothetical protein | I4I81_10295 | Not Available | Positive | 2171611 - 2171970 | 12693.1 |
| mfs transporter | I4I81_10300 | P37482 | Positive | 2171989 - 2173221 | 41499.8 |
| spoiie family protein phosphatase | I4I81_10305 | E0X9C7 | Positive | 2173321 - 2178234 | 172299.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
