Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase n-terminal domain-containing protein | I4I81_10060 | A9WC41 | Negative | 2123604 - 2124422 | 29334.1 |
| class i sam-dependent rna methyltransferase | I4I81_10065 | Q93HB4 | Negative | 2124427 - 2125611 | 41168.0 |
| apc family permease | I4I81_10070 | P96589 | Negative | 2125608 - 2127674 | 74223.2 |
| trka family potassium uptake protein | I4I81_10075 | Q53949 | Positive | 2127735 - 2128397 | 23497.1 |
| trka family potassium uptake protein | I4I81_10080 | P9WFZ2 | Positive | 2128401 - 2129057 | 23285.0 |
| cation transporter | I4I81_10085 | P9WGF4 | Negative | 2129061 - 2130101 | 36052.7 |
| helix-turn-helix transcriptional regulator | I4I81_10090 | O53838 | Positive | 2130140 - 2130487 | 12466.9 |
| duf3159 domain-containing protein | I4I81_10095 | Not Available | Negative | 2130484 - 2131083 | 21132.2 |
| ob-fold nucleic acid binding domain-containing protein | I4I81_10100 | Not Available | Negative | 2131179 - 2131556 | 13729.3 |
| alpha/beta hydrolase | I4I81_10105 | Not Available | Positive | 2131722 - 2132450 | 24371.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
