Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4142 domain-containing protein | I4I81_09960 | Not Available | Negative | 2099665 - 2100669 | 35339.2 |
| ferric reductase-like transmembrane domain-containing protein | I4I81_09965 | Q0SJK8 | Negative | 2100695 - 2102026 | 47252.3 |
| mfs transporter | I4I81_09970 | P0AEX3 | Negative | 2102315 - 2103604 | 46111.8 |
| dienelactone hydrolase family protein | I4I81_09975 | Q8ZAL4 | Negative | 2103664 - 2104374 | 24378.0 |
| tetr family transcriptional regulator | I4I81_09980 | Q0S7V2 | Negative | 2104384 - 2105031 | 23324.5 |
| mfs transporter | I4I81_09985 | Q5XBB2 | Negative | 2105160 - 2106692 | 53993.6 |
| arac family transcriptional regulator | I4I81_09990 | P35319 | Negative | 2106722 - 2107648 | 32693.7 |
| pyridoxamine 5'-phosphate oxidase family protein | I4I81_09995 | Not Available | Positive | 2107730 - 2108152 | 15613.5 |
| hypothetical protein | I4I81_10000 | Not Available | Negative | 2108145 - 2108372 | 7936.38 |
| abc transporter atp-binding protein | I4I81_10005 | P63398 | Negative | 2108384 - 2110318 | 69258.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
