Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyl-amp synthase | I4I81_09910 | P0AFR5 | Negative | 2089372 - 2089992 | 22762.2 |
| alpha/beta hydrolase | I4I81_09915 | O34842 | Negative | 2090002 - 2090595 | 20705.5 |
| ring-cleaving dioxygenase | I4I81_09920 | O34543 | Negative | 2090592 - 2091536 | 33635.5 |
| sugar phosphate isomerase/epimerase | I4I81_09925 | P54724 | Negative | 2091569 - 2092570 | 37228.3 |
| gfo/idh/moca family oxidoreductase | I4I81_09930 | P55480 | Negative | 2092567 - 2093703 | 40681.2 |
| substrate-binding domain-containing protein | I4I81_09935 | P36949 | Negative | 2093700 - 2094758 | 35665.9 |
| abc transporter permease | I4I81_09940 | P0AGI3 | Negative | 2094788 - 2095777 | 33530.0 |
| sugar abc transporter atp-binding protein | I4I81_09945 | Q9RDI1 | Negative | 2095785 - 2097269 | 52396.2 |
| rok family protein | I4I81_09950 | Q9KCZ4 | Positive | 2097365 - 2098594 | 41814.1 |
| pecanex-like protein 1 | I4I81_09955 | Not Available | Negative | 2098581 - 2099588 | 34319.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
