Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | I4I81_09860 | Not Available | Positive | 2078636 - 2079544 | 29638.8 |
| helix-turn-helix domain-containing protein | I4I81_09865 | P29094 | Negative | 2079676 - 2081321 | 60618.8 |
| rok family transcriptional regulator | I4I81_09870 | D2PPN2 | Positive | 2081397 - 2082563 | 39407.8 |
| tetratricopeptide repeat protein | I4I81_09875 | Not Available | Negative | 2082721 - 2084088 | 47079.1 |
| hypothetical protein | I4I81_09880 | Not Available | Negative | 2084114 - 2084353 | 8553.27 |
| duf397 domain-containing protein | I4I81_09885 | Not Available | Positive | 2084521 - 2084754 | 8234.8 |
| xre family transcriptional regulator | I4I81_09890 | Not Available | Positive | 2084787 - 2085389 | 22292.6 |
| rlua family pseudouridine synthase | I4I81_09895 | Q9CK02 | Positive | 2085392 - 2086318 | 34817.1 |
| hypothetical protein | I4I81_09900 | Not Available | Positive | 2086315 - 2086905 | 22657.3 |
| eal domain-containing protein | I4I81_09905 | Q9I310 | Positive | 2087002 - 2089350 | 82221.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
