Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | I4I81_09810 | P83788 | Positive | 2071502 - 2072710 | 43031.4 |
| marr family transcriptional regulator | I4I81_09815 | P25150 | Positive | 2072791 - 2073228 | 16026.2 |
| sdr family oxidoreductase | I4I81_09820 | P66778 | Positive | 2073449 - 2074219 | 26382.0 |
| 5-formyltetrahydrofolate cyclo-ligase | I4I81_09825 | Q3URQ7 | Positive | 2074216 - 2074980 | 26745.8 |
| duf3152 domain-containing protein | I4I81_09830 | Not Available | Negative | 2074971 - 2075753 | 26391.5 |
| vtt domain-containing protein | I4I81_09835 | P9WFS2 | Positive | 2075797 - 2076426 | 21237.0 |
| hypothetical protein | I4I81_09840 | Not Available | Negative | 2076436 - 2076642 | 7794.52 |
| hypothetical protein | I4I81_09845 | Not Available | Positive | 2076661 - 2076900 | 8793.23 |
| hypothetical protein | I4I81_09850 | Not Available | Negative | 2076902 - 2077219 | 10159.2 |
| plp-dependent aminotransferase family protein | I4I81_09855 | P49309 | Negative | 2077252 - 2078610 | 47598.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
