Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aim24 family protein | I4I81_09710 | Not Available | Positive | 2045123 - 2045791 | 23811.3 |
| alpha-amylase family protein | I4I81_09715 | Q84HD6 | Negative | 2045792 - 2047759 | 72020.2 |
| intradiol ring-cleavage dioxygenase | I4I81_09720 | P95607 | Negative | 2048273 - 2049067 | 27292.6 |
| hypothetical protein | I4I81_09725 | Not Available | Positive | 2049139 - 2050017 | 31584.4 |
| ferritin-like domain-containing protein | I4I81_09730 | Not Available | Positive | 2050086 - 2051072 | 35419.9 |
| hypothetical protein | I4I81_09735 | Not Available | Negative | 2051137 - 2051499 | 12080.9 |
| atp-dependent helicase hrpb | I4I81_09740 | P37024 | Positive | 2051552 - 2054044 | 88452.0 |
| hypothetical protein | I4I81_09745 | Not Available | Negative | 2053998 - 2054165 | 5747.64 |
| hypothetical protein | I4I81_09750 | Not Available | Positive | 2054363 - 2054767 | 13989.4 |
| sdr family nad(p)-dependent oxidoreductase | I4I81_09755 | Q5UNS8 | Positive | 2054779 - 2056194 | 50569.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
