Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3817 domain-containing protein | I4I81_09560 | O54101 | Negative | 2015883 - 2016278 | 14295.6 |
| hypothetical protein | I4I81_09565 | Not Available | Positive | 2016289 - 2016483 | 6775.73 |
| penicillin-binding protein | I4I81_09570 | A0R7G2 | Negative | 2016465 - 2018504 | 68993.9 |
| duf4383 domain-containing protein | I4I81_09575 | Not Available | Positive | 2018666 - 2019322 | 22123.6 |
| tigr03854 family llm class f420-dependent oxidoreductase | I4I81_09580 | A6WD69 | Positive | 2019377 - 2020255 | 30925.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | I4I81_09585 | P13254 | Positive | 2020252 - 2021457 | 41907.0 |
| chorismate-binding protein | I4I81_09590 | P72539 | Negative | 2021414 - 2023348 | 67970.2 |
| amp-binding protein | I4I81_09595 | F4HUK6 | Negative | 2023371 - 2024927 | 55865.4 |
| acyl-coa dehydrogenase family protein | I4I81_09600 | P96831 | Positive | 2024962 - 2026248 | 47235.4 |
| hypothetical protein | I4I81_09605 | Not Available | Negative | 2026245 - 2026424 | 6413.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
